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Genetic Engineering


Sticky Ends

In carpentry you use saws and nails to remove things and stick them together, in Biology we use enzymes.

The first type of enzyme are restriction endonucleases. Their job is to cut a strand of DNA at a specific area of the code called a recognition site. Genetic engineers have a large number of restriction endonucleases for different recognition sites so that cuts can be made in specific places.

The opposite of that is DNA ligase which puts together two strands of DNA as opposed to a single strand which DNA polymerase does.

sticky ends

After the DNA has been removed using this enzyme you get sticky ends which is at the end of the fragment and is 'sticky' because it wants to become part of a DNA strand again.

Using Bacteria

A common method in genetic engineering is to find a gene for a useful product (e.g. insulin) and get a microorganism to produce it.

This is done using a vector which carry things between species. In the case of using bacteria, the vector is the plasmid which is a circle of DNA found in bacterial cytoplasm. It can easily be opened up and a DNA fragment inserted into it.

The vector can be encouraged to enter the cell by heat shock where the temperature is raised rapidly from 0 to 40°C or you also could use electroporation where a high voltage is used to disrupt the cell membrane.

identifying bacteria by genetic markers

The above steps show how the gene is added to a plasmid. The plasmid already has a gene for antibiotic resistance to Tetracycline and Ampicillin as shown by the black areas. Then a restriction endonuclease is introduced that will cut the gene in between the Tetracycline resistance gene; and an insulin gene is added.

At the bottom of the diagram shows the possible outcomes of this situation. Plasmid A shows there has been no change because the plasmid rejoined up after being but or was never cut. Plasmid B shows that the insulin gene has been accepted into the the sticky ends and now disrupts the Tetra resistance gene. Plasmid C shows that the insulin gene has curled up into the it's own little plasmid.

There is another situation of plasmid, which is the same as B, however instead of an insulin gene disrupting the Tetra resistance gene, it is another gene fragment (that we aren't interested in. However for simplicity of explanation this has been omitted.

identifying bacteria with replica plating

In step 3 the different bacteria with these plasmid are cultured. Using a process called replica plating where a piece of velvet is put on top of the master plate bacteria, then transfered to make a copy onto the next. The cultures are next grown on a plate containing Ampicillin, this will kill the bacteria without the resistance to the gene, i.e bacteria with plasmid C (ring on insulin) and bacteria without our plasmid at all.

What is left on the Amp plate will be bacteria with plasmids A and B (see diagram above this one). These are now transfered to a final plate containing Tetracycline. This will kill bacteria containing plasmid B because the Tetra. resistance gene has been disrupted by the insulin gene. Now all we have to do is compare the bacterial colonies to see where the insulin containing bacteria are.

Culturing

Now that we have identified the bacteria that can produce insulin we need to get it manufactured on a large scale; this can be done using fermentation.

The microorganisms are put into the fermenter which provides the optimum conditions for bacterial or fungal growth, including nutrients like amino acids to make the protein, oxygen for respiration and warmth to keep them happy.